This book constitutes the refereed proceedings of the International Symposium on Knowledge Exploration in Life Science Informatics, KELSI 2004, held in Milan, Italy in November 2004.
The 20 revised full papers presented were carefully reviewed and selected for inclusion in the book. Among the topics covered are proteomic data analysis, rule induction, multiple sequence alignment, pattern extraction, microarray analysis, functional data analysis, text mining, artificial life, evolutionary algorithms, randomized algorithms, feature extraction, classification, case-based learning, and bioscience education.
Author(s): Johannes J. Mandel (auth.), Jesús A. López, Emilio Benfenati, Werner Dubitzky (eds.)
Series: Lecture Notes in Computer Science 3303 : Lecture Notes in Artificial Intelligence
Edition: 1
Publisher: Springer-Verlag Berlin Heidelberg
Year: 2004
Language: English
Pages: 250
Tags: Artificial Intelligence (incl. Robotics); Database Management; Computation by Abstract Devices; Algorithm Analysis and Problem Complexity; Bioinformatics; Computer Appl. in Life Sciences
Front Matter....Pages -
A Pen-and-Paper Notation for Teaching Biosciences....Pages 1-8
An Exploration of Some Factors Affecting the Correlation of mRNA and Proteomic Data....Pages 9-19
Improving Rule Induction Precision for Automated Annotation by Balancing Skewed Data Sets....Pages 20-32
A Randomized Algorithm for Distance Matrix Calculations in Multiple Sequence Alignment....Pages 33-45
Extracting Sequential Patterns for Gene Regulatory Expressions Profiles....Pages 46-57
Data Analysis of Microarrays Using SciCraft....Pages 58-68
Functional Data Analysis of the Dynamics of Gene Regulatory Networks....Pages 69-83
Text Mining of Full Text Articles and Creation of a Knowledge Base for Analysis of Microarray Data....Pages 84-95
Analysis of Protein/Protein Interactions Through Biomedical Literature: Text Mining of Abstracts vs. Text Mining of Full Text Articles....Pages 96-108
Ranking for Medical Annotation: Investigating Performance, Local Search and Homonymy Recognition....Pages 109-123
A New Artificial Life Formalization Model: A Worm with a Bayesian Brain....Pages 124-138
Teaching Grasping to a Humanoid Hand as a Generalization of Human Grasping Data....Pages 139-150
JavaSpaces – An Affordable Technology for the Simple Implementation of Reusable Parallel Evolutionary Algorithms....Pages 151-160
Detecting and Adapting to Concept Drift in Bioinformatics....Pages 161-168
Feature Extraction and Classification of the Auditory Brainstem Response Using Wavelet Analysis....Pages 169-180
Evaluation of Outcome Prediction for a Clinical Diabetes Database....Pages 181-190
Cytochrome P450 Classification of Drugs with Support Vector Machines Implementing the Nearest Point Algorithm....Pages 191-205
Multiple-Instance Case-Based Learning for Predictive Toxicology....Pages 206-220
Modelling and Prediction of Toxicity of Environmental Pollutants....Pages 221-234
Modelling Aquatic Toxicity with Advanced Computational Techniques: Procedures to Standardize Data and Compare Models....Pages 235-248
Back Matter....Pages -
