This book constitutes the thoroughly refereed post-conference proceedings of the 23rd International Symposium on High Performance Computing Systems and Applications, HPCS 2009, held in Kingston, Canada, in June 2009. The 29 revised full papers presented - fully revised to incorporate reviewers' comments and discussions at the symposium - were carefully selected for inclusion in the book. The papers are organized in topical sections on turbulence, materials and life sciences, bringing HPC to industry, computing science, mathematics, and statistics, as well as HPC systems and methods.
Author(s): Dustin Bespalko, Andrew Pollard, Mesbah Uddin (auth.), Douglas J. K. Mewhort, Natalie M. Cann, Gary W. Slater, Thomas J. Naughton (eds.)
Series: Lecture Notes in Computer Science 5976 : Theoretical Computer Science and General Issues
Edition: 1
Publisher: Springer-Verlag Berlin Heidelberg
Year: 2010
Language: English
Pages: 418
Tags: Software Engineering/Programming and Operating Systems; Information Systems Applications (incl.Internet); Computer Systems Organization and Communication Networks; Algorithm Analysis and Problem Complexity; User Interfaces and Human Compu
Front Matter....Pages -
Direct Numerical Simulation of Fully-Developed Turbulent Channel Flow Using the Lattice Boltzmann Method and Analysis of OpenMP Scalability....Pages 1-19
Parallel Computations of Unsteady Three-Dimensional Flows in a High Pressure Turbine....Pages 20-29
Application of Parallel Processing to the Simulation of Heart Mechanics....Pages 30-47
A Hybrid Parallel Algorithm for Transforming Finite Element Functions from Adaptive to Cartesian Grids....Pages 48-61
Leveraging Multicore Cluster Nodes by Adding OpenMP to Flow Solvers Parallelized with MPI....Pages 62-69
A Maxwell-Schrödinger-Plasma Model and Computing Aspects for Intense, High Frequency and Ultrashort Laser-Gas Interaction....Pages 70-75
The Implementation of Polarizable and Flexible Models in Molecular Dynamics Simulations....Pages 76-98
Efficient Numerical Methods for the Time-Dependent Schroedinger Equation for Molecules in Intense Laser Fields....Pages 99-108
A Parallel Algorithm for Computing the Spectrum of CH $_5^+$ ....Pages 109-116
Modeling the Interactions between Poly(N-Vinylpyrrolidone) and Gas Hydrates: Factors Involved in Suppressing and Accelerating Hydrate Growth....Pages 117-133
Nonlinear Time-Dependent Density Functional Theory Studies of Ionization in CO 2 and N 2 by Intense Laser Pulses and Molecular Orbital Reconstruction....Pages 134-147
Considerations for Progressive Damage in Fiber-Reinforced Composite Materials Subject to Fatigue....Pages 148-164
Parallelizing Power Systems Simulation for Multi-core Clusters: Design for an SME....Pages 165-179
OpenMP Parallelization of a Mickens Time-Integration Scheme for a Mixed-Culture Biofilm Model and Its Performance on Multi-core and Multi-processor Computers....Pages 180-195
An Evaluation of Parallel Numerical Hessian Calculations....Pages 196-214
Preliminary Findings of Visualization of the Interruptible Moment....Pages 215-229
SCTP, XTP and TCP as Transport Protocols for High Performance Computing on Multi-cluster Grid Environments....Pages 230-240
Dynamic Resource Matching for Multi-clusters Based on an Ontology-Fuzzy Approach....Pages 241-250
Domain Decomposition of Stochastic PDEs: A Novel Preconditioner and Its Parallel Performance....Pages 251-268
Interactive Data Mining on a CBEA Cluster....Pages 269-282
Service-Oriented Grid Computing for SAFORAH....Pages 283-291
IO Pattern Characterization of HPC Applications....Pages 292-303
Failure Data-Driven Selective Node-Level Duplication to Improve MTTF in High Performance Computing Systems....Pages 304-322
Out-of-Core Parallel Frontier Search with MapReduce....Pages 323-336
Hybrid MPI-Cell Parallelism for Hyperbolic PDE Simulation on a Cell Processor Cluster....Pages 337-348
BW-DCache : An Inexpensive, Effective and Reliable Cache Solution in a SAN File System....Pages 349-365
Object-Oriented OpenMP Programming with C++ and Fortran....Pages 366-377
FFT-Based Dense Polynomial Arithmetic on Multi-cores....Pages 378-399
Case Study of Scientific Data Processing on a Cloud Using Hadoop....Pages 400-415
Back Matter....Pages -
