Genomic Diversity in People of India: Focus on mtDNA and Y-Chromosome polymorphism

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This book is the output of Anthropological Survey of India's National Project "DNA Polymorphism of Contemporary Indian Population" conducted during 2000 to 2018. The book compiles the independent and collaborative work of 49 scientific personnel. Genomics facilitate the study of genetic constitution and diversity at individual and population levels. Genomic diversity explains susceptibility, predisposition and prolongation of diseases; personalized medicine and longevity; prehistoric demographic events, such as population bottleneck, expansion, admixture and natural selection.

This book highlights the heterogeneous, genetically diverse population of India. It shows how the central geographic location of India, played a crucial role in historic and pre-historic human migrations, and in peopling different continents of the world. The book describes the massive task undertaken by AnSI to unearth genomic diversity of India populations, with the use of Uni-parental DNA markers mtDNA (mitochondrial DNA) and Y –chromosome in 75 communities. The book talks about the 61 maternal and 35 paternal lineages identified through these studies. It brings forth interesting, hitherto unknown findings such as shared mutations between certain communities.

This volume is a milestone in scientific research to understand biological diversity of Indian people at genomic level. It addresses the basic priority to identify different genes underlying various inborn genetic defects and diseases specific to Indian populations. This would be highly interesting to population geneticists, historians, as well as anthropologists. 

Author(s): Anthropological Survey Of India
Publisher: Springer
Year: 2021

Language: English
Pages: 468
City: Singapore

Foreword
Contributors
Acknowledgement
Contents
Abbreviations
List of Figures
List of Tables
Chapter 1: Introduction
People of India
Ethnic and Linguistic Diversity
Tribal Populations
The Anthropological Survey of India´s Initiative
References
Chapter 2: Mitochondrial DNA Phylogeny in Indian Population
MtDNA M-Macrohaplogroup
M-Haplogroups in North East India
East Asian M-Haplogroups in India
Age Estimates
Detailed mtDNA Genotypes and Peopling of Andaman Island
Link Between India to Australia
References
Chapter 3: Mitochondrial DNA Phylogeny of N-Haplogroup in Indian Population
Haplogroup U
References
Chapter 4: mtDNA 9-bp INDEL Polymorphism (np 8272-8280) Among Indian Population
References
Chapter 5: Population Diversity and Molecular Diversity Indices Based on mtDNA Among Indian Population
Macrohaplogroup M Lineages in North-East India
Origin of Macrohaplogroup M (Part of the Data Has Been Published in the Article from Elsewhere: Chandrasekar et al. 2009)
Migration Routes of Modern Human (Part of the Data Has Been Published in the Article from Elsewhere: Chandrasekar et al. 2009)
Evolutionary Antiquity of mtDNA Lineage, M2 Among Indian Populations (Part of the Data Has Been Published in the Article from ...
Genetic Link Between Indians and Australian Aborigines
Genetic Link Between Indians and Andaman Islands Aborigines (Part of the Data Has Been Published in the Article from Elsewhere...
Molecular Diversity Indices
References
Chapter 6: Y-Chromosome Phylogeny in Indian Population
Multi Dimension Analysis for Y-Chromosome SNP
YAP (Y-Chromosome Alu Polymorphism) Insertion in Indian Samples (Part of the Data Has Been Published in the Article from Elsew...
Evolutionary Implications
References
Chapter 7: Genomic Diversity of 75 Communities in India
Alu Kurumba
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Andh
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Angami Naga
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Betta Kuruba
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Bharia
Paternal Lineage (Y Chromosomal Haplogroups)
Bhoi Khasi
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Bhoksa
Paternal Lineage (Y Chromosomal Haplogroups)
Bhotia
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Bondo
Paternal Lineage (Y Chromosomal Haplogroups)
Chenchu
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Damor
Paternal Lineage (Y Chromosomal Haplogroups)
Dhodia
Paternal Lineage (Y Chromosomal Haplogroups)
Dirang Monpa
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Dungri Bhil
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Gadia Lohar
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Galong
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Garwali Brahmin
Paternal Lineage (Y Chromosomal Haplogroups)
Garhwali Rajput
Paternal Lineage (Y Chromosomal Haplogroups)
Ghorkha
Paternal Lineage (Y Chromosomal Haplogroups)
Kolam
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Hmar
Paternal Lineage (Y Chromosomal Haplogroups)
Irular
Paternal Lineage (Y Chromosome Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Jarawa
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Jaunsari
Paternal Lineage (Y Chromosomal Haplogroups)
Jenu Kuruba
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Ka Thakur
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Kamar
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Kanikkar
Paternal Lineage (Y Chromosomal Haplogroups)
Karen
Paternal Lineage (Y Chromosomal Haplogroups)
Kathodi
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Katkari
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Kattunayakan
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Kutia Kondh
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Konda Reddis
Paternal Lineage (Y Chromosomal Haplogroups)
Koraga
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Korku
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Kota
Paternal Lineage (Y Chromosomal Haplogroups)
Koya
Paternal Lineage (Y Chromosomal Haplogroups)
Lachungpa
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Lepcha
Paternal Lineage (Y Chromosomal)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Ma Thakur
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Madia
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Mal Paharia
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Mara
Paternal Lineage (Y Chromosomal Haplogroups)
Mathur
Paternal Lineage (Y Chromosomal Haplogroups)
Mina
Paternal Lineage (Y Chromosomal Haplogroups)
Melacheri
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Mizo
Paternal Lineage (Y Chromosomal Haplogroups)
Mullu Kurumba
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Munda
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Nayaka
Paternal Lineage (Y Chromosomal Haplogroups)
Nicobarese
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Nihal
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Nishi
Paternal Lineage (Y Chromosomal Haplogroups)
Padhar
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Paite
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Paniyan
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Pauri Bhuinya
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Porja
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Rabha
Paternal Lineage (Y Chromosomal Haplogroups)
Raji
Paternal Lineage (Y Chromosomal Haplogroups)
Saharia
Paternal Lineage (Y Chromosomal Haplogroups)
Savaras
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Sherdukpen
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Soliga
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Sonowal Kachari
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Tai Ahom
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Tai Khampti
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Tharu
Paternal Lineage (Y Chromosomal Haplogroups)
Toda
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Toto
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Urali Kuruman
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Wancho
Paternal Lineage (Y Chromosomal Haplogroups)
Maternal Lineage (mtDNA Haplogroups)
Molecular Diversity
Yanadi
Paternal Lineage (Y Chromosomal Haplogroups)
Yerukulas
Paternal Lineage (Y Chromosomal Haplogroups)
References
Index