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Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics: 6th European Conference, EvoBIO 2008, Naples, Italy, March 26-28, 2008. Proceedings

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This book constitutes the refereed proceedings of the 6th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, EvoBIO 2008, held in Naples, Italy, in March 2008 colocated with the Evo* 2008 events.

The 18 revised full papers were carefully reviewed and selected from 63 submissions. EvoBio is the premiere European event for experts in computer science meeting with experts in bioinformatics and the biological sciences, all interested in the interface between evolutionary computation, machine learning, data mining, bioinformatics, and computational biology. Topics addressed by the papers include biomarker discovery, cell simulation and modeling, ecological modeling, uxomics, gene networks, biotechnology, metabolomics, microarray analysis, phylogenetics, protein interactions, proteomics, sequence analysis and alignment, as well as systems biology.

Author(s): Amin Assareh, Mohammad Hassan Moradi (auth.), Elena Marchiori, Jason H. Moore (eds.)
Series: Lecture Notes in Computer Science 4973 : Theoretical Computer Science and General Issues
Edition: 1
Publisher: Springer-Verlag Berlin Heidelberg
Year: 2008

Language: English
Pages: 213
Tags: Programming Techniques; Computation by Abstract Devices; Algorithm Analysis and Problem Complexity; Computational Biology/Bioinformatics; Pattern Recognition; Artificial Intelligence (incl. Robotics)

Front Matter....Pages -
A Hybrid Random Subspace Classifier Fusion Approach for Protein Mass Spectra Classification....Pages 1-11
Using Ant Colony Optimization-Based Selected Features for Predicting Post-synaptic Activity in Proteins....Pages 12-23
Generating Linkage Disequilibrium Patterns in Data Simulations Using genomeSIMLA....Pages 24-35
DEEPER: A Full Parsing Based Approach to Protein Relation Extraction....Pages 36-47
Improving the Performance of Hierarchical Classification with Swarm Intelligence....Pages 48-60
Protein Interaction Inference Using Particle Swarm Optimization Algorithm....Pages 61-70
Divide, Align and Full-Search for Discovering Conserved Protein Complexes....Pages 71-82
Detection of Quantitative Trait Associated Genes Using Cluster Analysis....Pages 83-94
Frequent Subsplit Representation of Leaf-Labelled Trees....Pages 95-105
Inference on Missing Values in Genetic Networks Using High-Throughput Data....Pages 106-116
Mining Gene Expression Patterns for the Discovery of Overlapping Clusters....Pages 117-128
Development and Evaluation of an Open-Ended Computational Evolution System for the Genetic Analysis of Susceptibility to Common Human Diseases....Pages 129-140
Gene Selection and Cancer Microarray Data Classification Via Mixed-Integer Optimization....Pages 141-152
Detection of Protein Complexes in Protein Interaction Networks Using n-Clubs....Pages 153-164
Learning Gaussian Graphical Models of Gene Networks with False Discovery Rate Control....Pages 165-176
Enhancing Parameter Estimation of Biochemical Networks by Exponentially Scaled Search Steps....Pages 177-187
A Wrapper-Based Feature Selection Method for ADMET Prediction Using Evolutionary Computing....Pages 188-199
On the Convergence of Protein Structure and Dynamics. Statistical Learning Studies of Pseudo Folding Pathways....Pages 200-211
Back Matter....Pages -