Euro-Par 2006: Parallel Processing: Workshops: CoreGRID 2006, UNICORE Summit 2006, Petascale Computational Biology and Bioinformatics, Dresden, Germany, August 29-September 1, 2006, Revised Selected Papers

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This book constitutes the thoroughly refereed joint post-proceedings of the three International Workshops on Grid Middleware, CoreGrid 2006, the UNICORE Summit 2006, and the Workshop on Petascale Computational Biology and Bioinformatics, held in Dresden, Germany, in August/September 2006, in conjunction with Euro-Par 2006, the 12th International Conference on Parallel Computing.

The 29 revised full papers presented were carefully reviewed and selected from a total of 50 submissions. The 16 papers presented at the CoreGRID Workshop on Grid Middleware focused on knowledge and data management on grids, grid resource management and scheduling, as well as grid information, resource and workflow monitoring services. The 8 papers presented at the UNICORE Summit 2006 show current developments and implementations of the UNICORE middleware system, which today is used in daily production worldwide. Beyond this production usage, the UNICORE technology serves as a solid basis in many European and International projects. The concern of the 5 papers of the Petascale Computational Biology and Bioinformatics Workshop was to show what bioinformatics or computational biology applications can or should accomplish with petascale computing environments, and what obstacles must be overcome in order to implement and use effective and important problems in the life sciences (biology, biochemistry, environmental sciences, etc.).

Author(s): Norbert Meyer, Domenico Talia, Ramin Yahyapour (auth.), Wolfgang Lehner, Norbert Meyer, Achim Streit, Craig Stewart (eds.)
Series: Lecture Notes in Computer Science 4375
Edition: 1
Publisher: Springer-Verlag Berlin Heidelberg
Year: 2007

Language: English
Pages: 332
Tags: Computer Systems Organization and Communication Networks; Software Engineering/Programming and Operating Systems; Theory of Computation; Numeric Computing; Data Mining and Knowledge Discovery

Front Matter....Pages -
Front Matter....Pages 1-1
Introduction....Pages 3-4
Architecture of a Network Monitoring Element....Pages 5-14
Support for Automatic Diagnosis and Dynamic Configuration of Scalable Storage Systems....Pages 15-21
Adding Dynamism to OGSA-DQP: Incorporating the DynaSOAr Framework in Distributed Query Processing....Pages 22-33
Review of Security Models Applied to Distributed Data Access....Pages 34-48
Security Requirements Analysis for Large-Scale Distributed File Systems....Pages 49-60
Coupling Contracts for Deployment on Alien Grids....Pages 61-73
A Transparent Framework for Hierarchical Master-Slave Grid Computing....Pages 74-86
A Multi-level Scheduler for the Grid Computing YML Framework....Pages 87-100
Virtual Environments - Framework for Virtualized Resource Access in the Grid....Pages 101-111
Grid Meta-Broker Architecture: Towards an Interoperable Grid Resource Brokering Service....Pages 112-115
A Super-Peer Model for Multiple Job Submission on a Grid....Pages 116-125
A Scheduling Algorithm for High Performance Peer-to-Peer Platform....Pages 126-137
Brokering Multi-grid Workflows in the P-GRADE Portal....Pages 138-149
Diet: New Developments and Recent Results....Pages 150-170
Execution Support of High Performance Heterogeneous Component-Based Applications on the Grid....Pages 171-185
Towards a Grid Information Knowledge Base....Pages 186-190
Front Matter....Pages 191-191
Introduction....Pages 193-193
A Versatile Execution Management System for Next-Generation UNICORE Grids....Pages 195-204
Towards More Flexible and Increased Security and Privacy in Grids....Pages 205-214
Front Matter....Pages 191-191
Integration of Grid Cost Model into ISS/VIOLA Meta-scheduler Environment....Pages 215-224
A One-Stop, Fire-and-(Almost)Forget, Dropping-Off and Rendezvous Point....Pages 225-234
Grid-Based Processing of High-Volume Meteorological Data Sets....Pages 235-244
BLAST Application on the GPE/UnicoreGS Grid....Pages 245-253
Job Management Enterprise Application....Pages 254-263
UNICORE Deployment Within the DEISA Supercomputing Grid Infrastructure....Pages 264-273
Front Matter....Pages 275-275
Introduction....Pages 277-277
Progress in Scaling Biomolecular Simulations to Petaflop Scale Platforms....Pages 279-288
Progress Towards Petascale Applications in Biology: Status in 2006....Pages 289-303
Toward a Solution of the Reverse Engineering Problem Using FPGAs....Pages 304-312
Two Challenges in Genomics That Can Benefit from Petascale Platforms....Pages 313-322
High Throughput Image Analysis on PetaFLOPS Systems....Pages 323-329
Back Matter....Pages -