Essential Mathematical Biology

This monograph presents the timed input/output automaton (TIOA) modeling framework, a basic mathematical framework to support description and analysis of timed (computing) systems. Timed systems are systems in which desirable correctness or performance properties of the system depend on the timing of events, not just on the order of their occurrence. Timed systems are employed in a wide range of domains including communications, embedded systems, real-time operating systems, and automated control. Many applications involving timed systems have strong safety, reliability, and predictability requirements, which makes it important to have methods for systematic design of systems and rigorous analysis of timing-dependent behavior. An important feature of the TIOA framework is its support for decomposing timed system descriptions. In particular, the framework includes a notion of external behavior for a TIOA, which captures its discrete interactions with its environment. The framework also defines what it means for one TIOA to implement another, based on an inclusion relationship between their external behavior sets, and defines notions of simulations, which provide sufficient conditions for demonstrating implementation relationships. The framework includes a composition operation for TIOAs, which respects external behavior, and a notion of receptiveness, which implies that a TIOA does not block the passage of time "Essential Mathematical Biology is a self-contained introduction to the fast-growing field of mathematical biology. Written for students with a mathematical background, it sets the subject in its historical context and then guides the reader towards questions of current research interest, providing a comprehensive overview of the field and a solid foundation for interdisciplinary research in the biological sciences."--BOOK JACKET.  Read more... 1. Single Species Population Dynamics -- 2. Population Dynamics of Interacting Species -- 3. Infectious Diseases -- 4. Population Genetics and Evolution -- 5. Biological Motion -- 6. Molecular and Cellular Biology -- 7. Pattern Formation -- 8. Tumour Modelling -- A. Some Techniques for Difference Equations -- B. Some Techniques for Ordinary Differential Equations -- C. Some Techniques for Partial Differential Equations -- D. Non-negative Matrices