Analysis of Parallel Spike Trains

This document was uploaded by one of our users. The uploader already confirmed that they had the permission to publish it. If you are author/publisher or own the copyright of this documents, please report to us by using this DMCA report form.

Simply click on the Download Book button.

Yes, Book downloads on Ebookily are 100% Free.

Sometimes the book is free on Amazon As well, so go ahead and hit "Search on Amazon"

Action potentials, or spikes, are the most salient expression of neuronal processing in the active brain, and they are likely an important key to understanding the neuronal mechanisms of behavior. However, it is the group dynamics of large networks of neurons that is likely to underlie brain function, and this can only be appreciated if the action potentials from multiple individual nerve cells are observed simultaneously. Techniques that employ multi-electrodes for parallel spike train recordings have been available for many decades, and their use has gained wide popularity among neuroscientists. To reliably interpret the results of such electrophysiological experiments, solid and comprehensible data analysis is crucial. The development of data analysis methods, though, has not really kept pace with the advances in recording technology. Neither general concepts, nor statistical methodology seem adequate for the new experimental possibilities. Promising approaches are scattered across journal publications, and the relevant mathematical background literature is buried deep in journals of different fields. Compiling a useful reader for students or collaborators is both laborious and frustrating. This situation led us to gather state-of-the-art methodologies for analyzing parallel spike trains into a single book, which then might serve as a vantage point for current techniques and a launching point for future development. To our knowledge, this is the first textbook with an explicit focus on the subject. It contains 20 chapters, each of them written by selected experts in the field.

About the Editors:
Sonja Grün, born 1960, received her MSc (University of Tübingen and Max-Planck Institute for Biological Cybernetics) and PhD (University of Bochum, Weizmann Institute of Science in Rehovot) in physics (theoretical neuroscience), and her Habilitation (University of Freiburg) in neurobiology and biophysics. During her postdoc at the Hebrew University in Jerusalem, she performed multiple single-neuron recordings in behaving monkeys. Equipped with this experience she returned back to computational neuroscience to further develop analysis tools for multi-electrode recordings, first at the Max-Planck Institute for Brain Research in Frankfurt/Main and then as an assistant professor at the Freie Universität in Berlin associated with the local Bernstein Center for Computational Neuroscience. Since 2006 she has been unit leader for statistical neuroscience at the RIKEN Brain Science Institute in Wako-Shi, Japan. Her scientific work focuses on cooperative network dynamics relevant for brain function and behavior. Stefan Rotter, born 1961, holds a MSc in Mathematics, a PhD in Physics and a Habilitation in Biology. Since 2008, he has been Professor at the Faculty of Biology and the Bernstein Center Freiburg, a multidisciplinary research institution for Computational Neuroscience and Neurotechnology at Albert-Ludwig University Freiburg. His research is focused on the relations between structure, dynamics, and function in spiking networks of the brain. He combines neuronal network modeling and spike train analysis, often using stochastic point processes as a conceptual link.

Author(s): Carl van Vreeswijk (auth.), Sonja Grün, Stefan Rotter (eds.)
Series: Springer Series in Computational Neuroscience 7
Edition: 1
Publisher: Springer US
Year: 2010

Language: English
Pages: 444
Tags: Neurosciences; Neurobiology

Front Matter....Pages I-XIX
Front Matter....Pages 1-1
Stochastic Models of Spike Trains....Pages 3-20
Estimating the Firing Rate....Pages 21-35
Analysis and Interpretation of Interval and Count Variability in Neural Spike Trains....Pages 37-58
Processing of Phase-Locked Spikes and Periodic Signals....Pages 59-74
Front Matter....Pages 75-75
Pair-Correlation in the Time and Frequency Domain....Pages 77-102
Dependence of Spike-Count Correlations on Spike-Train Statistics and Observation Time Scale....Pages 103-127
Spike Metrics....Pages 129-156
Gravitational Clustering....Pages 157-172
Front Matter....Pages 173-173
Spatio-Temporal Patterns....Pages 175-189
Unitary Event Analysis....Pages 191-220
Information Geometry of Multiple Spike Trains....Pages 221-252
Higher-Order Correlations and Cumulants....Pages 253-280
Front Matter....Pages 281-281
Information Theory and Systems Neuroscience....Pages 283-301
Population Coding....Pages 303-319
Stochastic Models for Multivariate Neural Point Processes: Collective Dynamics and Neural Decoding....Pages 321-341
Front Matter....Pages 343-343
Simulation of Stochastic Point Processes with Defined Properties....Pages 345-357
Generation and Selection of Surrogate Methods for Correlation Analysis....Pages 359-382
Bootstrap Tests of Hypotheses....Pages 383-398
Generating Random Numbers....Pages 399-411
Practically Trivial Parallel Data Processing in a Neuroscience Laboratory....Pages 413-436
Erratum to: Population Coding....Pages E1-E1
Back Matter....Pages 439-443