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Advances in Bioinformatics and Computational Biology: 4th Brazilian Symposium on Bioinformatics, BSB 2009, Porto Alegre, Brazil, July 29-31, 2009. Proceedings

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This book constitutes the refereed proceedings of the 4th Brazilian Symposium on Bioinformatics, BSB 2009, held in Porto Alegre, Brazil, in July 2009

The 12 revised full papers and 6 extended abstracts were carefully reviewed and selected from 55 submissions. The papers are organized in topical sections on algorithmic approaches for molecular biology problems; micro-array analysis; machine learning methods for classification; and in silico simulation.

Author(s): Irina Astrovskaya, Alex Zelikovsky (auth.), Katia S. Guimarães, Anna Panchenko, Teresa M. Przytycka (eds.)
Series: Lecture Notes in Computer Science 5676 : Lecture Notes in Bioinformatics
Edition: 1
Publisher: Springer-Verlag Berlin Heidelberg
Year: 2009

Language: English
Pages: 169
Tags: Database Management; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Health Informatics; Artificial Intelligence (incl. Robotics); Algorithm Analysis and Problem Complexity

Front Matter....Pages -
Genotype Tagging with Limited Overfitting....Pages 1-12
Constraint Programming Models for Transposition Distance Problem....Pages 13-23
Comparison of Spectra in Unsequenced Species....Pages 24-35
BiHEA: A Hybrid Evolutionary Approach for Microarray Biclustering....Pages 36-47
Using Supervised Complexity Measures in the Analysis of Cancer Gene Expression Data Sets....Pages 48-59
Quantitative Improvements in cDNA Microarray Spot Segmentation....Pages 60-72
SOM-PORTRAIT: Identifying Non-coding RNAs Using Self-Organizing Maps....Pages 73-85
Automatic Classification of Enzyme Family in Protein Annotation....Pages 86-96
Representations for Evolutionary Algorithms Applied to Protein Structure Prediction Problem Using HP Model....Pages 97-108
Comparing Methods for Multilabel Classification of Proteins Using Machine Learning Techniques....Pages 109-120
Comparative Study of Classification Algorithms Using Molecular Descriptors in Toxicological DataBases....Pages 121-132
Influence of Antigenic Mutations in Time Evolution of the Immune Memory – A Dynamic Modeling....Pages 133-142
FReDD: Supporting Mining Strategies through a Flexible-Receptor Docking Database....Pages 143-146
A Wide Antimicrobial Peptides Search Method Using Fuzzy Modeling....Pages 147-150
Identification of Proteins from Tuberculin Purified Protein Derivative (PPD) with Potential for TB Diagnosis Using Bioinformatics Analysis....Pages 151-155
Mapping HIV-1 Subtype C gp120Epitopes Using a Bioinformatic Approach....Pages 156-159
MHC: Peptide Analysis: Implications on the Immunogenicity of Hantaviruses’ N protein....Pages 160-163
An Ontology to Integrate Transcriptomics and Interatomics Data Involved in Gene Pathways of Genome Stability....Pages 164-167
Back Matter....Pages -