Mathematical Support for Molecular Biology: Papers Related to the Special Year in Mathematical Support for Molecular Biology 1994-1998

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Author(s): Martin Farach-Colton, Fred S. Roberts, Martin Vingron, Michael Waterman
Series: Discrete Mathematics and Theoretical Computer Science
Publisher: American Mathematical Society
Year: 1999

Language: English
Pages: 312

An introduction to molecular biology for mathematicians and computer programmers by W. M. Fitch
A Sequence alignment and phylogeny construction by M. Vingron
A new look at tree models for multiple sequence alignment by D. Durand
Sequence alignment in molecular biology by A. Apostolico and R. Giancarlo
Formal language theory and biological macromolecules by D. B. Searls
Global optimization approaches in protein folding and peptide docking by C. A. Floudas, J. L. Klepeis, and P. M. Pardalos
The topologically driven strand separation transition in DNA---methods of analysis and biological significance by C. J. Benham
Parallel strategies for DNA manipulation and analysis by C. L. Smith, T. Sano, N. E. Broude, and C. R. Cantor
A column-generation based branch-and-bound algorithm for sorting by reversals by A. Caprara, G. Lancia, and S.-K. Ng
Visualizing measures of genetic distance by E. M. Jordan
Fragment assembly system for DNA sequencing projects by L. Milanesi, M. Marsilli, G. Mauri, C. Rolfi, and L. Uboldi
Performance of the CAP2 sequence assembly program by X. Huang A simple toolkit for DNA fragment assembly by J. Meidanis.